Pseudomonadaceae bacterium SI-3

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Description

Pseudomonadaceae bacterium SI-3 is characterized by having a single replicon, which is a notable trait for its genomic structure. The organism is cataloged under the accession number NZ_CP026511.1, indicating its sequence data is accessible for further studies. The Pseudomonadaceae family is known for its ecological significance and diverse metabolic capabilities. Members of this family are often found in various environments, including soil, water, and plant surfaces, where they play crucial roles in nutrient cycling and bioremediation processes. The presence of a single replicon suggests that Pseudomonadaceae bacterium SI-3 may exhibit a streamlined genomic organization, which can be advantageous for rapid growth and adaptability in fluctuating environmental conditions. This trait may facilitate efficient replication and potentially quick responses to ecological challenges. In summary, Pseudomonadaceae bacterium SI-3, with its single replicon and documented genomic information, represents a species within a family renowned for its ecological versatility. Understanding its genomic characteristics can provide insights into its adaptability and functionality within its ecological niche.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonadaceae bacterium SI-3 chromosome, complete genome.

Gene Summary

Adenine Count

962262 bp

Thymine Count

962681 bp

Guanine Count

1458492 bp

Cytosine Count

1455172 bp

Genome Length

4838607 bp

Protein-coding Genes

4379 genes

Non-Coding Genes

85 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf493 domain-containing proteinC1896_RS19050Not AvailableNegative4077250 - 407753410458.5
d-alanyl-d-alanine carboxypeptidase family proteinC1896_RS19055Not AvailableNegative4077595 - 407875242405.7
septal ring lytic transglycosylase rlpa family proteinC1896_RS19060Not AvailableNegative4078827 - 407981035115.5
lytic murein transglycosylase bC1896_RS19065Not AvailableNegative4079807 - 408079936736.4
rod shape-determining protein rodaC1896_RS19070Not AvailableNegative4080838 - 408198341564.5
penicillin-binding protein 2C1896_RS19075Not AvailableNegative4081980 - 408386969969.1
23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmhC1896_RS19080Not AvailableNegative4083886 - 408435317691.5
ribosome silencing factorC1896_RS19085Not AvailableNegative4084361 - 408472012992.3
nicotinate-nucleotide adenylyltransferaseC1896_RS19090Not AvailableNegative4084735 - 408539424335.0
glutamate-5-semialdehyde dehydrogenaseC1896_RS19095Not AvailableNegative4085394 - 408665945372.4

Displaying genes 3801 – 3810 of 4464 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.