Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | /taxonomy?family=Pseudomonadaceae&kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&order=Pseudomonadales&phylum=Pseudomonadota |
| Species | Pseudomonadaceae bacterium SI-3 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
962262 bp
Thymine Count
962681 bp
Guanine Count
1458492 bp
Cytosine Count
1455172 bp
Genome Length
4838607 bp
Protein-coding Genes
4379 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C1896_RS01535 | Not Available | Negative | 321055 - 321189 | 4786.67 |
| lipase family protein | C1896_RS01540 | Not Available | Negative | 321384 - 322913 | 57012.4 |
| hypothetical protein | C1896_RS01545 | Not Available | Negative | 323526 - 324272 | 27756.8 |
| duf4123 domain-containing protein | C1896_RS01550 | Not Available | Negative | 324272 - 325120 | 32863.6 |
| type vi secretion system tip protein vgrg | C1896_RS01555 | Not Available | Negative | 325117 - 327192 | 77470.7 |
| sigma-54 interaction domain-containing protein | C1896_RS01560 | Not Available | Negative | 327209 - 328717 | 55895.6 |
| type vi secretion system atpase tssh | C1896_RS01565 | Not Available | Negative | 328728 - 331331 | 94667.6 |
| type vi secretion system baseplate subunit tssg | C1896_RS01570 | Not Available | Negative | 331343 - 332350 | 38094.6 |
| type vi secretion system baseplate subunit tssf | C1896_RS01575 | Not Available | Negative | 332314 - 334104 | 67843.7 |
| paar domain-containing protein | C1896_RS01580 | Not Available | Negative | 334133 - 334408 | 8778.59 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
