Pseudomonadaceae bacterium SI-3

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Description

Pseudomonadaceae bacterium SI-3 is characterized by having a single replicon, which is a notable trait for its genomic structure. The organism is cataloged under the accession number NZ_CP026511.1, indicating its sequence data is accessible for further studies. The Pseudomonadaceae family is known for its ecological significance and diverse metabolic capabilities. Members of this family are often found in various environments, including soil, water, and plant surfaces, where they play crucial roles in nutrient cycling and bioremediation processes. The presence of a single replicon suggests that Pseudomonadaceae bacterium SI-3 may exhibit a streamlined genomic organization, which can be advantageous for rapid growth and adaptability in fluctuating environmental conditions. This trait may facilitate efficient replication and potentially quick responses to ecological challenges. In summary, Pseudomonadaceae bacterium SI-3, with its single replicon and documented genomic information, represents a species within a family renowned for its ecological versatility. Understanding its genomic characteristics can provide insights into its adaptability and functionality within its ecological niche.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonadaceae bacterium SI-3 chromosome, complete genome.

Gene Summary

Adenine Count

962262 bp

Thymine Count

962681 bp

Guanine Count

1458492 bp

Cytosine Count

1455172 bp

Genome Length

4838607 bp

Protein-coding Genes

4379 genes

Non-Coding Genes

85 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lateral flagellin lafaC1896_RS01030Not AvailableNegative212600 - 21351131374.1
flagellar basal body p-ring formation chaperone flgaC1896_RS01035Not AvailableNegative213799 - 21447624217.1
hypothetical proteinC1896_RS22375Not AvailablePositive214357 - 21470712963.8
flagellar basal body rod protein flgbC1896_RS01040Not AvailablePositive214704 - 21506913519.0
flagellar basal body rod protein flgcC1896_RS01045Not AvailablePositive215073 - 21550115404.1
flagellar hook capping flgd n-terminal domain-containing proteinC1896_RS01050Not AvailablePositive215507 - 21618423458.6
flagellar hook protein flgeC1896_RS01055Not AvailablePositive216235 - 21742240830.2
flagellar basal-body rod protein flgfC1896_RS01060Not AvailablePositive217432 - 21816025840.8
flagellar basal-body rod protein flggC1896_RS01065Not AvailablePositive218175 - 21896027036.0
flagellar basal body l-ring protein flghC1896_RS01070Not AvailablePositive218966 - 21963123637.1

Displaying genes 221 – 230 of 4464 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.