Pseudomonadaceae bacterium SI-3

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Description

Pseudomonadaceae bacterium SI-3 is characterized by having a single replicon, which is a notable trait for its genomic structure. The organism is cataloged under the accession number NZ_CP026511.1, indicating its sequence data is accessible for further studies. The Pseudomonadaceae family is known for its ecological significance and diverse metabolic capabilities. Members of this family are often found in various environments, including soil, water, and plant surfaces, where they play crucial roles in nutrient cycling and bioremediation processes. The presence of a single replicon suggests that Pseudomonadaceae bacterium SI-3 may exhibit a streamlined genomic organization, which can be advantageous for rapid growth and adaptability in fluctuating environmental conditions. This trait may facilitate efficient replication and potentially quick responses to ecological challenges. In summary, Pseudomonadaceae bacterium SI-3, with its single replicon and documented genomic information, represents a species within a family renowned for its ecological versatility. Understanding its genomic characteristics can provide insights into its adaptability and functionality within its ecological niche.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonadaceae bacterium SI-3 chromosome, complete genome.

Gene Summary

Adenine Count

962262 bp

Thymine Count

962681 bp

Guanine Count

1458492 bp

Cytosine Count

1455172 bp

Genome Length

4838607 bp

Protein-coding Genes

4379 genes

Non-Coding Genes

85 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nad(p) transhydrogenase subunit alphaC1896_RS00780Not AvailableNegative162248 - 16256811338.5
re/si-specific nad(p)(+) transhydrogenase subunit alphaC1896_RS00785Not AvailableNegative162582 - 16370339121.3
type ii secretion system atpase gspeC1896_RS00790Not AvailablePositive164226 - 16573756001.8
gspf family t2ss innner membrane protein variant xcpsC1896_RS00795Not AvailablePositive165899 - 16711343735.2
type ii secretion system major pseudopilin gspgC1896_RS00800Not AvailablePositive167119 - 16755315807.9
type ii secretion system minor pseudopilin gsphC1896_RS00805Not AvailablePositive167557 - 16813221604.6
type ii secretion system minor pseudopilin gspiC1896_RS00810Not AvailablePositive168129 - 16853614347.2
type ii secretion system minor pseudopilin gspjC1896_RS00815Not AvailablePositive168533 - 16924926967.5
type ii secretion system minor pseudopilin gspkC1896_RS00820Not AvailablePositive169246 - 17022935922.0
type ii secretion system protein gsplC1896_RS00825Not AvailablePositive170233 - 17137541218.0

Displaying genes 171 – 180 of 4464 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.