Pseudomonas sp. PONIH3

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. PONIH3 is characterized by possessing a single replicon, which indicates a streamlined genomic structure. The strain is cataloged under the accession number NZ_CP026386.1, providing a reference point for genetic studies and comparisons with related Pseudomonas species. Pseudomonas species are known for their metabolic diversity and adaptability to various environments, including soil, water, and plant surfaces. While specific ecological roles of Pseudomonas sp. PONIH3 are not detailed in the provided information, Pseudomonas species are generally recognized for their capabilities in bioremediation, the degradation of organic pollutants, and interactions with plant systems, including promoting plant growth and suppressing plant pathogens. The single replicon trait could suggest a more efficient replication process, which may enhance its survival and adaptability in fluctuating environments. This efficiency in genomic replication could confer advantages in nutrient-poor conditions or under stress, potentially allowing Pseudomonas sp. PONIH3 to thrive in various ecological niches. In summary, Pseudomonas sp. PONIH3, with its single replicon structure, may exhibit traits advantageous for survival and metabolic versatility, reflecting the broader ecological significance of Pseudomonas species in diverse environments and their potential applications in environmental microbiology and agriculture.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. PONIH3
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. PONIH3
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. PONIH3 chromosome, complete genome.

Gene Summary

Adenine Count

1158264 bp

Thymine Count

1151962 bp

Guanine Count

1995865 bp

Cytosine Count

2007461 bp

Genome Length

6313552 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf1161 domain-containing proteinC3F42_RS16955Not AvailableNegative3685399 - 36856207489.43
dodecinC3F42_RS16960Not AvailableNegative3685723 - 36859387959.42
yqjd family proteinC3F42_RS16965Not AvailablePositive3686088 - 368641111867.1
lysr family transcriptional regulatorC3F42_RS16970Not AvailableNegative3686408 - 368730432446.9
tryptophan synthase subunit betaC3F42_RS16975Not AvailablePositive3687416 - 368863344061.8
tryptophan synthase subunit alphaC3F42_RS16980Not AvailablePositive3688630 - 368943928367.0
dopa 4,5-dioxygenase family proteinC3F42_RS16985Not AvailableNegative3689514 - 368984612540.2
choline sulfate utilization transcriptional regulatorC3F42_RS16990Not AvailableNegative3689898 - 369079433443.4
choline-sulfataseC3F42_RS16995Not AvailablePositive3690904 - 369242157564.3
choline abc transporter substrate-binding proteinC3F42_RS17000Not AvailablePositive3692436 - 369335933475.2

Displaying genes 3441 – 3450 of 5884 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.