Pseudomonas sp. PONIH3

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. PONIH3 is characterized by possessing a single replicon, which indicates a streamlined genomic structure. The strain is cataloged under the accession number NZ_CP026386.1, providing a reference point for genetic studies and comparisons with related Pseudomonas species. Pseudomonas species are known for their metabolic diversity and adaptability to various environments, including soil, water, and plant surfaces. While specific ecological roles of Pseudomonas sp. PONIH3 are not detailed in the provided information, Pseudomonas species are generally recognized for their capabilities in bioremediation, the degradation of organic pollutants, and interactions with plant systems, including promoting plant growth and suppressing plant pathogens. The single replicon trait could suggest a more efficient replication process, which may enhance its survival and adaptability in fluctuating environments. This efficiency in genomic replication could confer advantages in nutrient-poor conditions or under stress, potentially allowing Pseudomonas sp. PONIH3 to thrive in various ecological niches. In summary, Pseudomonas sp. PONIH3, with its single replicon structure, may exhibit traits advantageous for survival and metabolic versatility, reflecting the broader ecological significance of Pseudomonas species in diverse environments and their potential applications in environmental microbiology and agriculture.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. PONIH3
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. PONIH3
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. PONIH3 chromosome, complete genome.

Gene Summary

Adenine Count

1158264 bp

Thymine Count

1151962 bp

Guanine Count

1995865 bp

Cytosine Count

2007461 bp

Genome Length

6313552 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
agmatine/peptidylarginine deiminaseC3F42_RS12630Not AvailablePositive2728529 - 272957837872.7
n-carbamoylputrescine amidaseC3F42_RS12635Not AvailablePositive2729575 - 273047133229.5
extracellular solute-binding proteinC3F42_RS12640Not AvailablePositive2730475 - 273156940544.7
agmatine/peptidylarginine deiminaseC3F42_RS12645Not AvailablePositive2731574 - 273269840762.9
ompa family proteinC3F42_RS12650Not AvailableNegative2732747 - 273346625110.4
mbl fold metallo-hydrolaseC3F42_RS12655Not AvailableNegative2733562 - 273420623719.5
sensor histidine kinaseC3F42_RS12660Not AvailableNegative2734276 - 273496825307.0
tetratricopeptide repeat-containing response regulatorC3F42_RS12665Not AvailableNegative2734965 - 273657259140.2
luxr c-terminal-related transcriptional regulatorC3F42_RS12670Not AvailableNegative2736883 - 2739600100730.0
duf1329 domain-containing proteinC3F42_RS12675Not AvailableNegative2739810 - 274117450718.0

Displaying genes 2571 – 2580 of 5884 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.