Pseudomonas sp. PONIH3

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. PONIH3 is characterized by possessing a single replicon, which indicates a streamlined genomic structure. The strain is cataloged under the accession number NZ_CP026386.1, providing a reference point for genetic studies and comparisons with related Pseudomonas species. Pseudomonas species are known for their metabolic diversity and adaptability to various environments, including soil, water, and plant surfaces. While specific ecological roles of Pseudomonas sp. PONIH3 are not detailed in the provided information, Pseudomonas species are generally recognized for their capabilities in bioremediation, the degradation of organic pollutants, and interactions with plant systems, including promoting plant growth and suppressing plant pathogens. The single replicon trait could suggest a more efficient replication process, which may enhance its survival and adaptability in fluctuating environments. This efficiency in genomic replication could confer advantages in nutrient-poor conditions or under stress, potentially allowing Pseudomonas sp. PONIH3 to thrive in various ecological niches. In summary, Pseudomonas sp. PONIH3, with its single replicon structure, may exhibit traits advantageous for survival and metabolic versatility, reflecting the broader ecological significance of Pseudomonas species in diverse environments and their potential applications in environmental microbiology and agriculture.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. PONIH3
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. PONIH3
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. PONIH3 chromosome, complete genome.

Gene Summary

Adenine Count

1158264 bp

Thymine Count

1151962 bp

Guanine Count

1995865 bp

Cytosine Count

2007461 bp

Genome Length

6313552 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
signal peptidase iC3F42_RS10440Not AvailableNegative2265161 - 226601532024.2
translation elongation factor 4C3F42_RS10445Not AvailableNegative2266021 - 226782066144.9
degq family serine endoproteaseC3F42_RS10450Not AvailableNegative2268022 - 226942849839.0
mucb/rseb c-terminal domain-containing proteinC3F42_RS10455Not AvailableNegative2269630 - 227059535011.6
sigma-e factor negative regulatory proteinC3F42_RS10460Not AvailableNegative2270608 - 227119821044.9
rna polymerase sigma factor rpoeC3F42_RS10465Not AvailableNegative2271230 - 227181122267.3
l-aspartate oxidaseC3F42_RS10470Not AvailablePositive2272248 - 227386159659.9
nad(p)h-quinone oxidoreductaseC3F42_RS10475Not AvailableNegative2273951 - 227491333585.6
carboxy terminal-processing peptidaseC3F42_RS10480Not AvailablePositive2275058 - 227713977599.5
bifunctional diguanylate cyclase/phosphodiesteraseC3F42_RS10485Not AvailablePositive2277248 - 227900564965.2

Displaying genes 2131 – 2140 of 5884 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.