Sphingobium sp. SCG-1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingobiaceae

Genus

Sphingobium

Description

Sphingobium sp. SCG-1 is a species of bacteria characterized by the presence of flagella, which suggests it has the capability for motility. This trait may contribute to its ecological adaptability and ability to navigate through various environments. Genetically, Sphingobium sp. SCG-1 possesses two replicons, indicating a complex genomic organization that could support versatile metabolic pathways. The strain is documented under the GenBank accessions NZ_CP026372.1 and NZ_CP026373.1, which provide a basis for its genetic analysis and further research. These accessions are vital for studying the genomic features of Sphingobium sp. SCG-1, including its environmental interactions and potential applications in bioremediation or other biotechnology fields. In summary, the presence of flagella coupled with a dual-replicon structure suggests that Sphingobium sp. SCG-1 is well-equipped for survival and adaptation in varied ecological niches. Such traits are significant for understanding how this bacterium might play a role in ecological processes, particularly in environments where motility and metabolic flexibility are advantageous.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingobiaceae
GenusSphingobium
SpeciesSphingobium sp. SCG-1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingobium sp. SCG-1 chromosome.

Gene Summary

Adenine Count

841341 bp

Thymine Count

840791 bp

Guanine Count

1287987 bp

Cytosine Count

1306188 bp

Genome Length

4276407 bp

Protein-coding Genes

3898 genes

Non-Coding Genes

95 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
diacylglycerol/lipid kinase family proteinC1T17_RS19270Not AvailableNegative4181273 - 418224134504.3
duf2141 domain-containing proteinC1T17_RS19275Not AvailableNegative4182260 - 418280219326.4
lps export abc transporter permease lptfC1T17_RS19280Not AvailablePositive4182935 - 418414344459.3
lps export abc transporter permease lptgC1T17_RS19285Not AvailablePositive4184140 - 418524039302.3
fatty acid desaturase family proteinC1T17_RS19290Not AvailableNegative4185248 - 418630038679.8
n-acetyltransferaseC1T17_RS19295Not AvailablePositive4186475 - 418763243064.4
tonb-dependent receptorC1T17_RS19300Not AvailableNegative4187934 - 419037289251.4
sterol desaturase family proteinC1T17_RS19305Not AvailableNegative4190569 - 419159438455.0
hypothetical proteinC1T17_RS19310Not AvailableNegative4191918 - 419283532179.4
putative urea abc transporter substrate-binding proteinC1T17_RS19315Not AvailablePositive4192970 - 419405537982.5

Displaying genes 3901 – 3910 of 4242 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.