Sphingobium sp. SCG-1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingobiaceae

Genus

Sphingobium

Description

Sphingobium sp. SCG-1 is a species of bacteria characterized by the presence of flagella, which suggests it has the capability for motility. This trait may contribute to its ecological adaptability and ability to navigate through various environments. Genetically, Sphingobium sp. SCG-1 possesses two replicons, indicating a complex genomic organization that could support versatile metabolic pathways. The strain is documented under the GenBank accessions NZ_CP026372.1 and NZ_CP026373.1, which provide a basis for its genetic analysis and further research. These accessions are vital for studying the genomic features of Sphingobium sp. SCG-1, including its environmental interactions and potential applications in bioremediation or other biotechnology fields. In summary, the presence of flagella coupled with a dual-replicon structure suggests that Sphingobium sp. SCG-1 is well-equipped for survival and adaptation in varied ecological niches. Such traits are significant for understanding how this bacterium might play a role in ecological processes, particularly in environments where motility and metabolic flexibility are advantageous.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingobiaceae
GenusSphingobium
SpeciesSphingobium sp. SCG-1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingobium sp. SCG-1 chromosome.

Gene Summary

Adenine Count

841341 bp

Thymine Count

840791 bp

Guanine Count

1287987 bp

Cytosine Count

1306188 bp

Genome Length

4276407 bp

Protein-coding Genes

3898 genes

Non-Coding Genes

95 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glutathione s-transferase family proteinC1T17_RS16135Not AvailablePositive3494394 - 349507425523.3
duf1428 domain-containing proteinC1T17_RS16140Not AvailablePositive3495071 - 349542712876.3
voc family proteinC1T17_RS16145Not AvailablePositive3495442 - 349623027576.7
srpbcc domain-containing proteinC1T17_RS16150Not AvailablePositive3496247 - 349669916770.8
50s ribosomal protein l34C1T17_RS16155Not AvailablePositive3496834 - 34969685138.42
ribonuclease p protein componentC1T17_RS16160Not AvailablePositive3497001 - 349737513650.0
membrane protein insertion efficiency factor yiddC1T17_RS16165Not AvailablePositive3497372 - 34975847675.43
membrane protein insertase yidcC1T17_RS16170Not AvailablePositive3497638 - 349935363274.9
ribosome biogenesis gtp-binding protein yiha/ysxcC1T17_RS16175Not AvailablePositive3499350 - 350000923966.9
glutathione s-transferase family proteinC1T17_RS16180Not AvailablePositive3500038 - 350071224609.3

Displaying genes 3311 – 3320 of 4242 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.