Sphingobium sp. SCG-1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingobiaceae

Genus

Sphingobium

Description

Sphingobium sp. SCG-1 is a species of bacteria characterized by the presence of flagella, which suggests it has the capability for motility. This trait may contribute to its ecological adaptability and ability to navigate through various environments. Genetically, Sphingobium sp. SCG-1 possesses two replicons, indicating a complex genomic organization that could support versatile metabolic pathways. The strain is documented under the GenBank accessions NZ_CP026372.1 and NZ_CP026373.1, which provide a basis for its genetic analysis and further research. These accessions are vital for studying the genomic features of Sphingobium sp. SCG-1, including its environmental interactions and potential applications in bioremediation or other biotechnology fields. In summary, the presence of flagella coupled with a dual-replicon structure suggests that Sphingobium sp. SCG-1 is well-equipped for survival and adaptation in varied ecological niches. Such traits are significant for understanding how this bacterium might play a role in ecological processes, particularly in environments where motility and metabolic flexibility are advantageous.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingobiaceae
GenusSphingobium
SpeciesSphingobium sp. SCG-1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingobium sp. SCG-1 chromosome.

Gene Summary

Adenine Count

841341 bp

Thymine Count

840791 bp

Guanine Count

1287987 bp

Cytosine Count

1306188 bp

Genome Length

4276407 bp

Protein-coding Genes

3898 genes

Non-Coding Genes

95 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dienelactone hydrolase family proteinC1T17_RS15395Not AvailablePositive3344465 - 334519326164.1
duf4287 domain-containing proteinC1T17_RS15400Not AvailableNegative3345385 - 33455977883.49
mucr family transcriptional regulatorC1T17_RS15410Not AvailablePositive3346827 - 334775932375.9
yban family proteinC1T17_RS15415Not AvailableNegative3347861 - 334821112721.9
flp pilus assembly protein cpabC1T17_RS22150Not AvailablePositive3348525 - 33486705446.64
type ii toxin-antitoxin system vapc family toxinC1T17_RS15420Not AvailableNegative3348740 - 334914114409.3
antitoxinC1T17_RS15425Not AvailableNegative3349145 - 33493788650.52
hypothetical proteinC1T17_RS15430Not AvailablePositive3349632 - 33498116858.12
glycine zipper 2tm domain-containing proteinC1T17_RS15435Not AvailableNegative3349883 - 335041619654.6
duf3072 domain-containing proteinC1T17_RS15440Not AvailableNegative3350498 - 33507257996.22

Displaying genes 3161 – 3170 of 4242 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.