Sphingobium sp. SCG-1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingobiaceae

Genus

Sphingobium

Description

Sphingobium sp. SCG-1 is a species of bacteria characterized by the presence of flagella, which suggests it has the capability for motility. This trait may contribute to its ecological adaptability and ability to navigate through various environments. Genetically, Sphingobium sp. SCG-1 possesses two replicons, indicating a complex genomic organization that could support versatile metabolic pathways. The strain is documented under the GenBank accessions NZ_CP026372.1 and NZ_CP026373.1, which provide a basis for its genetic analysis and further research. These accessions are vital for studying the genomic features of Sphingobium sp. SCG-1, including its environmental interactions and potential applications in bioremediation or other biotechnology fields. In summary, the presence of flagella coupled with a dual-replicon structure suggests that Sphingobium sp. SCG-1 is well-equipped for survival and adaptation in varied ecological niches. Such traits are significant for understanding how this bacterium might play a role in ecological processes, particularly in environments where motility and metabolic flexibility are advantageous.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingobiaceae
GenusSphingobium
SpeciesSphingobium sp. SCG-1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingobium sp. SCG-1 chromosome.

Gene Summary

Adenine Count

841341 bp

Thymine Count

840791 bp

Guanine Count

1287987 bp

Cytosine Count

1306188 bp

Genome Length

4276407 bp

Protein-coding Genes

3898 genes

Non-Coding Genes

95 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
chemotaxis protein cheaC1T17_RS14665Not AvailableNegative3203184 - 320555685620.3
histidine phosphotransferase family proteinC1T17_RS14670Not AvailableNegative3205604 - 320629324048.1
mov34/mpn/pad-1 family proteinC1T17_RS14675Not AvailableNegative3206405 - 320682414925.8
rlua family pseudouridine synthaseC1T17_RS14680Not AvailablePositive3206841 - 320779734236.5
rna polymerase sigma factor rpohC1T17_RS14685Not AvailablePositive3207860 - 320876534278.2
monofunctional biosynthetic peptidoglycan transglycosylaseC1T17_RS14690Not AvailablePositive3208874 - 320958426235.1
tonb-dependent receptorC1T17_RS14695Not AvailableNegative3209687 - 321217988981.5
atp-dependent clp protease atp-binding subunit clpxC1T17_RS14700Not AvailableNegative3212642 - 321390745752.2
atp-dependent clp endopeptidase proteolytic subunit clppC1T17_RS14705Not AvailableNegative3214067 - 321469923209.2
glycosyltransferase family 2 proteinC1T17_RS14710Not AvailableNegative3214792 - 321575135290.2

Displaying genes 3031 – 3040 of 4242 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.