Sphingobium sp. SCG-1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingobiaceae

Genus

Sphingobium

Description

Sphingobium sp. SCG-1 is a species of bacteria characterized by the presence of flagella, which suggests it has the capability for motility. This trait may contribute to its ecological adaptability and ability to navigate through various environments. Genetically, Sphingobium sp. SCG-1 possesses two replicons, indicating a complex genomic organization that could support versatile metabolic pathways. The strain is documented under the GenBank accessions NZ_CP026372.1 and NZ_CP026373.1, which provide a basis for its genetic analysis and further research. These accessions are vital for studying the genomic features of Sphingobium sp. SCG-1, including its environmental interactions and potential applications in bioremediation or other biotechnology fields. In summary, the presence of flagella coupled with a dual-replicon structure suggests that Sphingobium sp. SCG-1 is well-equipped for survival and adaptation in varied ecological niches. Such traits are significant for understanding how this bacterium might play a role in ecological processes, particularly in environments where motility and metabolic flexibility are advantageous.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingobiaceae
GenusSphingobium
SpeciesSphingobium sp. SCG-1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingobium sp. SCG-1 chromosome.

Gene Summary

Adenine Count

841341 bp

Thymine Count

840791 bp

Guanine Count

1287987 bp

Cytosine Count

1306188 bp

Genome Length

4276407 bp

Protein-coding Genes

3898 genes

Non-Coding Genes

95 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type ii secretion system protein gspmC1T17_RS11900Not AvailableNegative2598111 - 259859017009.9
type ii secretion system protein gsplC1T17_RS11905Not AvailableNegative2598587 - 259970839171.3
type ii secretion system minor pseudopilin gspkC1T17_RS11910Not AvailableNegative2599705 - 260069134989.9
type ii secretion system minor pseudopilin gspjC1T17_RS11915Not AvailableNegative2600684 - 260131922444.9
type ii secretion system minor pseudopilin gspiC1T17_RS11920Not AvailableNegative2601316 - 260168413449.3
gsph/fimt family pseudopilinC1T17_RS11925Not AvailableNegative2601677 - 260215617157.6
type ii secretion system major pseudopilin gspgC1T17_RS11930Not AvailableNegative2602176 - 260268518490.1
type ii secretion system inner membrane protein gspfC1T17_RS11935Not AvailableNegative2602690 - 260391044390.1
type ii secretion system atpase gspeC1T17_RS11940Not AvailableNegative2603903 - 260550757523.2
type ii secretion system secretin gspdC1T17_RS11945Not AvailableNegative2605554 - 260778877834.4

Displaying genes 2471 – 2480 of 4242 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.