Sphingobium sp. SCG-1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingobiaceae

Genus

Sphingobium

Description

Sphingobium sp. SCG-1 is a species of bacteria characterized by the presence of flagella, which suggests it has the capability for motility. This trait may contribute to its ecological adaptability and ability to navigate through various environments. Genetically, Sphingobium sp. SCG-1 possesses two replicons, indicating a complex genomic organization that could support versatile metabolic pathways. The strain is documented under the GenBank accessions NZ_CP026372.1 and NZ_CP026373.1, which provide a basis for its genetic analysis and further research. These accessions are vital for studying the genomic features of Sphingobium sp. SCG-1, including its environmental interactions and potential applications in bioremediation or other biotechnology fields. In summary, the presence of flagella coupled with a dual-replicon structure suggests that Sphingobium sp. SCG-1 is well-equipped for survival and adaptation in varied ecological niches. Such traits are significant for understanding how this bacterium might play a role in ecological processes, particularly in environments where motility and metabolic flexibility are advantageous.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingobiaceae
GenusSphingobium
SpeciesSphingobium sp. SCG-1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingobium sp. SCG-1 chromosome.

Gene Summary

Adenine Count

841341 bp

Thymine Count

840791 bp

Guanine Count

1287987 bp

Cytosine Count

1306188 bp

Genome Length

4276407 bp

Protein-coding Genes

3898 genes

Non-Coding Genes

95 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
p-type conjugative transfer protein trbjC1T17_RS06730Not AvailableNegative1501371 - 150214727541.6
conjugal transfer protein trbeC1T17_RS06735Not AvailableNegative1502144 - 150460089737.9
virb3 family type iv secretion system proteinC1T17_RS06740Not AvailableNegative1504613 - 15048949799.09
trbc/virb2 family proteinC1T17_RS06745Not AvailableNegative1504894 - 150522611444.3
p-type conjugative transfer atpase trbbC1T17_RS06750Not AvailableNegative1505223 - 150620634484.6
copg family transcriptional regulatorC1T17_RS06755Not AvailableNegative1506376 - 150681015923.2
conjugal transfer protein tragC1T17_RS06760Not AvailableNegative1506820 - 150880873497.1
relaxase/mobilization nuclease domain-containing proteinC1T17_RS06765Not AvailableNegative1508833 - 151057264115.6
lytic transglycosylase domain-containing proteinC1T17_RS06770Not AvailableNegative1510817 - 151157526551.9
duf736 domain-containing proteinC1T17_RS06775Not AvailableNegative1511580 - 151192712744.8

Displaying genes 1421 – 1430 of 4242 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.