Salinigranum rubrum strain GX10

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Haloferacaceae

Genus

Salinigranum

Description

Salinigranum rubrum strain GX10 is characterized by having four distinct replicons. This feature is significant as it may contribute to the organism's genetic diversity and adaptability in various environments. The strain has been cataloged under several accessions: NZ_CP026311.1, NZ_CP026312.1, NZ_CP026313.1, and NZ_CP026314.1. These accessions are part of genomic databases that facilitate the study and comparison of microbial genomes, aiding in the understanding of the strain's evolutionary relationships and functional capabilities. The presence of multiple replicons in Salinigranum rubrum strain GX10 may allow for unique regulatory mechanisms and metabolic pathways, potentially enabling the strain to thrive in saline environments. This adaptability could be an ecological advantage, as the organism may play a role in biogeochemical cycles in its native habitat. Understanding the genomic structure of Salinigranum rubrum strain GX10 and its replicons can provide insights into its ecological role. For instance, the strain's ability to survive and flourish in high-salinity conditions may influence microbial community dynamics and nutrient cycling in saline ecosystems. This highlights the importance of studying such microorganisms, as they can contribute significantly to our understanding of life in extreme environments and may have applications in biotechnology or environmental management.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyHaloferacaceae
GenusSalinigranum
SpeciesSalinigranum rubrum
Strainstrain GX10

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Salinigranum rubrum strain GX10


Gene Summary

Adenine Count

23338 bp

Thymine Count

25580 bp

Guanine Count

34697 bp

Cytosine Count

35262 bp

Genome Length

118877 bp

Protein-coding Genes

133 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinC2R22_RS23485Not AvailablePositive58508 - 5880410507.2
shoct domain-containing proteinC2R22_RS23490Not AvailablePositive58863 - 5922212447.2
duf302 domain-containing proteinC2R22_RS23495Not AvailablePositive59747 - 6016614890.4
shoct domain-containing proteinC2R22_RS23500Not AvailablePositive60169 - 6052212815.8
thioredoxin family proteinC2R22_RS23505Not AvailablePositive60646 - 6095411455.3
plastocyanin/azurin family copper-binding proteinC2R22_RS23510Not AvailablePositive60976 - 6174926575.0
hypothetical proteinC2R22_RS23515Not AvailableNegative61730 - 6214615419.3
hypothetical proteinC2R22_RS25460Not AvailablePositive62180 - 623506075.46
trimeric intracellular cation channel family proteinC2R22_RS23520Not AvailablePositive62508 - 6345733612.2
copg family ribbon-helix-helix proteinC2R22_RS23525Not AvailableNegative63514 - 6392716222.0

Displaying genes 61 – 70 of 503 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.