Salinigranum rubrum strain GX10

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Haloferacaceae

Genus

Salinigranum

Description

Salinigranum rubrum strain GX10 is characterized by having four distinct replicons. This feature is significant as it may contribute to the organism's genetic diversity and adaptability in various environments. The strain has been cataloged under several accessions: NZ_CP026311.1, NZ_CP026312.1, NZ_CP026313.1, and NZ_CP026314.1. These accessions are part of genomic databases that facilitate the study and comparison of microbial genomes, aiding in the understanding of the strain's evolutionary relationships and functional capabilities. The presence of multiple replicons in Salinigranum rubrum strain GX10 may allow for unique regulatory mechanisms and metabolic pathways, potentially enabling the strain to thrive in saline environments. This adaptability could be an ecological advantage, as the organism may play a role in biogeochemical cycles in its native habitat. Understanding the genomic structure of Salinigranum rubrum strain GX10 and its replicons can provide insights into its ecological role. For instance, the strain's ability to survive and flourish in high-salinity conditions may influence microbial community dynamics and nutrient cycling in saline ecosystems. This highlights the importance of studying such microorganisms, as they can contribute significantly to our understanding of life in extreme environments and may have applications in biotechnology or environmental management.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyHaloferacaceae
GenusSalinigranum
SpeciesSalinigranum rubrum
Strainstrain GX10

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Salinigranum rubrum strain GX10 plasmid unnamed3, complete

Gene Summary

Adenine Count

23338 bp

Thymine Count

25580 bp

Guanine Count

34697 bp

Cytosine Count

35262 bp

Genome Length

118877 bp

Protein-coding Genes

133 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nad(p)-dependent oxidoreductaseC2R22_RS24320Not AvailableNegative107369 - 10830733207.4
hypothetical proteinC2R22_RS24325Not AvailableNegative108448 - 10997952887.9
tripartite tricarboxylate transporter tctb family proteinC2R22_RS24330Not AvailableNegative110124 - 11061217680.1
bug family tripartite tricarboxylate transporter substrate binding proteinC2R22_RS24335Not AvailableNegative110609 - 11156534104.3
acetyl-coa hydrolase/transferase c-terminal domain-containing proteinC2R22_RS24340Not AvailableNegative111715 - 11206512432.7
hypothetical proteinC2R22_RS27630Not AvailableNegative112076 - 1122255263.28
hypothetical proteinC2R22_RS24345Not AvailableNegative112218 - 11281221759.5
electron transfer flavoprotein subunit alpha/fixb family proteinC2R22_RS24350Not AvailableNegative112869 - 11381633507.3
electron transfer flavoprotein subunit beta/fixa family proteinC2R22_RS24355Not AvailableNegative113813 - 11460728463.0
mmge/prpd family proteinC2R22_RS24360Not AvailablePositive115027 - 11575826396.9

Displaying genes 481 – 490 of 503 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.