Stenotrophomonas sp. ESTM1D_MKCIP4_1

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Stenotrophomonas

Description

Stenotrophomonas sp. ESTM1D_MKCIP4_1 is a rod-shaped bacterium characterized by the presence of flagella, which suggests motility capabilities. This particular strain contains a single replicon, indicating a streamlined genomic organization that is typical for many bacteria in the genus Stenotrophomonas. The accession number for Stenotrophomonas sp. ESTM1D_MKCIP4_1 is NZ_CP026004.1, which allows for its identification and retrieval from genomic databases. This strain is part of a genus known for its environmental versatility and ability to thrive in diverse habitats, including soil and water. Stenotrophomonas species are often noted for their roles in bioremediation and their interactions with plants, potentially contributing to nutrient cycling in ecosystems. The motility conferred by flagella may enhance the bacterium's ability to colonize various environments and engage in symbiotic relationships. Understanding the traits of Stenotrophomonas sp. ESTM1D_MKCIP4_1 can provide insights into its ecological roles and potential applications in biotechnology and environmental management.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyLysobacteraceae
GenusStenotrophomonas
SpeciesStenotrophomonas sp. ESTM1D_MKCIP4_1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Stenotrophomonas sp. ESTM1D_MKCIP4_1 chromosome.

Gene Summary

Adenine Count

741267 bp

Thymine Count

744846 bp

Guanine Count

1495842 bp

Cytosine Count

1493685 bp

Genome Length

4475880 bp

Protein-coding Genes

3935 genes

Non-Coding Genes

108 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf2004 domain-containing proteinC1924_RS17745Not AvailablePositive3905505 - 390582511471.2
nuclear transport factor 2 family proteinC1924_RS17750Not AvailableNegative3905858 - 390628915901.0
giy-yig nuclease family proteinC1924_RS17755Not AvailableNegative3906411 - 390668610351.4
trimeric intracellular cation channel family proteinC1924_RS17760Not AvailablePositive3907018 - 390763522401.3
mdta/muxa family multidrug efflux rnd transporter periplasmic adaptor subunitC1924_RS17765Not AvailablePositive3907923 - 390910742480.5
multidrug efflux rnd transporter permease subunitC1924_RS17770Not AvailablePositive3909104 - 3912238111064.0
efflux rnd transporter permease subunitC1924_RS17775Not AvailablePositive3912235 - 3915294109637.0
type ii ta system antitoxin mqsa family proteinC1924_RS17780Not AvailableNegative3915426 - 391596219630.6
hypothetical proteinC1924_RS20390Not AvailableNegative3915991 - 391642516859.2
3-deoxy-7-phosphoheptulonate synthaseC1924_RS17790Not AvailableNegative3916904 - 391797738316.8

Displaying genes 3551 – 3560 of 4043 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.