Stenotrophomonas sp. ESTM1D_MKCIP4_1

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Stenotrophomonas

Description

Stenotrophomonas sp. ESTM1D_MKCIP4_1 is a rod-shaped bacterium characterized by the presence of flagella, which suggests motility capabilities. This particular strain contains a single replicon, indicating a streamlined genomic organization that is typical for many bacteria in the genus Stenotrophomonas. The accession number for Stenotrophomonas sp. ESTM1D_MKCIP4_1 is NZ_CP026004.1, which allows for its identification and retrieval from genomic databases. This strain is part of a genus known for its environmental versatility and ability to thrive in diverse habitats, including soil and water. Stenotrophomonas species are often noted for their roles in bioremediation and their interactions with plants, potentially contributing to nutrient cycling in ecosystems. The motility conferred by flagella may enhance the bacterium's ability to colonize various environments and engage in symbiotic relationships. Understanding the traits of Stenotrophomonas sp. ESTM1D_MKCIP4_1 can provide insights into its ecological roles and potential applications in biotechnology and environmental management.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyLysobacteraceae
GenusStenotrophomonas
SpeciesStenotrophomonas sp. ESTM1D_MKCIP4_1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Stenotrophomonas sp. ESTM1D_MKCIP4_1 chromosome.

Gene Summary

Adenine Count

741267 bp

Thymine Count

744846 bp

Guanine Count

1495842 bp

Cytosine Count

1493685 bp

Genome Length

4475880 bp

Protein-coding Genes

3935 genes

Non-Coding Genes

108 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phosphogluconate dehydrogenase (nad(+)-dependent, decarboxylating)C1924_RS17000Not AvailableNegative3739693 - 374059832354.7
hypothetical proteinC1924_RS17005Not AvailableNegative3740609 - 374186245665.2
duf2242 domain-containing proteinC1924_RS17010Not AvailableNegative3741865 - 374253023226.2
carboxy terminal-processing peptidaseC1924_RS17015Not AvailableNegative3742711 - 374488880025.5
lipoyl synthaseC1924_RS17020Not AvailableNegative3745133 - 374614337164.5
lipoyl(octanoyl) transferase lipbC1924_RS17025Not AvailableNegative3746162 - 374687225556.6
ybed family proteinC1924_RS17030Not AvailableNegative3746860 - 374713810540.4
lipid a deacylase lpxr family proteinC1924_RS17035Not AvailablePositive3747398 - 374845939101.8
d-alanyl-d-alanine carboxypeptidase family proteinC1924_RS17040Not AvailableNegative3748823 - 375004043376.6
septal ring lytic transglycosylase rlpa family proteinC1924_RS17045Not AvailableNegative3750139 - 375142544009.2

Displaying genes 3401 – 3410 of 4043 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.