Stenotrophomonas sp. ESTM1D_MKCIP4_1

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Stenotrophomonas

Description

Stenotrophomonas sp. ESTM1D_MKCIP4_1 is a rod-shaped bacterium characterized by the presence of flagella, which suggests motility capabilities. This particular strain contains a single replicon, indicating a streamlined genomic organization that is typical for many bacteria in the genus Stenotrophomonas. The accession number for Stenotrophomonas sp. ESTM1D_MKCIP4_1 is NZ_CP026004.1, which allows for its identification and retrieval from genomic databases. This strain is part of a genus known for its environmental versatility and ability to thrive in diverse habitats, including soil and water. Stenotrophomonas species are often noted for their roles in bioremediation and their interactions with plants, potentially contributing to nutrient cycling in ecosystems. The motility conferred by flagella may enhance the bacterium's ability to colonize various environments and engage in symbiotic relationships. Understanding the traits of Stenotrophomonas sp. ESTM1D_MKCIP4_1 can provide insights into its ecological roles and potential applications in biotechnology and environmental management.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyLysobacteraceae
GenusStenotrophomonas
SpeciesStenotrophomonas sp. ESTM1D_MKCIP4_1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Stenotrophomonas sp. ESTM1D_MKCIP4_1 chromosome.

Gene Summary

Adenine Count

741267 bp

Thymine Count

744846 bp

Guanine Count

1495842 bp

Cytosine Count

1493685 bp

Genome Length

4475880 bp

Protein-coding Genes

3935 genes

Non-Coding Genes

108 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
gfa family proteinC1924_RS06675Not AvailablePositive1442496 - 144297817853.2
23s rrna (guanosine(2251)-2'-o)-methyltransferase rlmbC1924_RS06680Not AvailablePositive1443075 - 144381825920.0
efflux transporter outer membrane subunitC1924_RS06685Not AvailableNegative1444354 - 144579351809.7
macb family efflux pump subunitC1924_RS06690Not AvailableNegative1445790 - 144774870130.7
efflux rnd transporter periplasmic adaptor subunitC1924_RS06695Not AvailableNegative1447745 - 144899243625.1
response regulatorC1924_RS06700Not AvailablePositive1449198 - 144992627316.0
atp-binding proteinC1924_RS06705Not AvailablePositive1449933 - 145133050634.3
ligand-binding sensor domain-containing diguanylate cyclaseC1924_RS06710Not AvailablePositive1451625 - 1454648111198.0
ribonuclease tC1924_RS06715Not AvailableNegative1455300 - 145588421066.1
rcnb family proteinC1924_RS06720Not AvailableNegative1456020 - 145633711815.1

Displaying genes 1371 – 1380 of 4043 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.