Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Pseudotamlana
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Pseudotamlana |
| Species | Pseudotamlana carrageenivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1336167 bp
Thymine Count
1329418 bp
Guanine Count
724468 bp
Cytosine Count
726490 bp
Genome Length
4116543 bp
Protein-coding Genes
3521 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system tube protein tssd | C1A40_RS16995 | Not Available | Negative | 3863098 - 3863490 | 14962.8 |
| tssn family type vi secretion system protein | C1A40_RS17000 | Not Available | Negative | 3863520 - 3864386 | 33369.5 |
| hypothetical protein | C1A40_RS17005 | Not Available | Negative | 3864398 - 3865312 | 35060.9 |
| c40 family peptidase | C1A40_RS17010 | Not Available | Negative | 3865340 - 3865936 | 22816.6 |
| pectinesterase family protein | C1A40_RS17015 | Not Available | Negative | 3866279 - 3870334 | 146485.0 |
| t9ss type a sorting domain-containing protein | C1A40_RS17020 | Not Available | Negative | 3870583 - 3870960 | 13914.1 |
| rhamnogalacturonan acetylesterase | C1A40_RS17025 | Not Available | Negative | 3870929 - 3872185 | 45443.3 |
| pectinesterase family protein | C1A40_RS17030 | Not Available | Negative | 3872284 - 3875016 | 98095.9 |
| acetylxylan esterase | C1A40_RS17035 | Not Available | Negative | 3875067 - 3876389 | 50049.3 |
| glycoside hydrolase family 28 protein | C1A40_RS17040 | Not Available | Negative | 3876411 - 3878114 | 62920.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
