Tamlana carrageenivorans strain UJ94

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Pseudotamlana

Description

Tamlana carrageenivorans strain UJ94 is characterized by a single replicon, indicating a streamlined genomic structure suitable for its ecological niche. The strain is cataloged under the accession number NZ_CP025938.1, which provides a reference for its genetic material in microbial databases. This bacterium is notable for its ability to degrade carrageenan, a polysaccharide commonly found in red algae. This capability suggests that Tamlana carrageenivorans plays a significant role in the microbial ecology of marine environments, particularly in the breakdown of algal biomass. Such degradation processes are crucial for nutrient cycling and energy flow in coastal ecosystems, where algal blooms can impact local biodiversity and water quality. The single replicon structure may also imply a potential adaptation to specific environmental conditions, allowing for efficient resource utilization in its habitat. By participating in the decomposition of carrageenan, Tamlana carrageenivorans strain UJ94 not only contributes to the recycling of organic materials but also influences the dynamics of microbial communities associated with algae. In summary, Tamlana carrageenivorans strain UJ94, with its single replicon and carrageenan-degrading capabilities, exemplifies a specialized bacterium that contributes to the ecological balance in marine environments through the decomposition of algal polysaccharides.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusPseudotamlana
SpeciesPseudotamlana carrageenivorans
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Tamlana carrageenivorans strain UJ94 chromosome, complete genome.

Gene Summary

Adenine Count

1336167 bp

Thymine Count

1329418 bp

Guanine Count

724468 bp

Cytosine Count

726490 bp

Genome Length

4116543 bp

Protein-coding Genes

3521 genes

Non-Coding Genes

110 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
bifunctional phosphoribosyl-amp cyclohydrolase/phosphoribosyl-atp diphosphatase hisieC1A40_RS15585Not AvailableNegative3544743 - 354536323121.5
imidazole glycerol phosphate synthase subunit hisfC1A40_RS15590Not AvailableNegative3545382 - 354613726950.3
1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomeraseC1A40_RS15595Not AvailableNegative3546228 - 354696226684.1
giy-yig nuclease family proteinC1A40_RS15600Not AvailableNegative3547019 - 354728510757.0
imidazole glycerol phosphate synthase subunit hishC1A40_RS15605Not AvailableNegative3547299 - 354796424343.2
bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase hisbC1A40_RS15610Not AvailableNegative3548055 - 354919143007.3
gnat family n-acetyltransferaseC1A40_RS15615Not AvailableNegative3549345 - 35495096289.81
histidinol-phosphate transaminaseC1A40_RS15620Not AvailableNegative3549670 - 355071338669.2
histidinol dehydrogenaseC1A40_RS15625Not AvailableNegative3550799 - 355208246337.6
atp phosphoribosyltransferaseC1A40_RS15630Not AvailableNegative3552093 - 355295031107.8

Displaying genes 3141 – 3150 of 3631 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.