Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain YDC107 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1284644 bp
Thymine Count
1281806 bp
Guanine Count
1314426 bp
Cytosine Count
1317435 bp
Genome Length
5198311 bp
Protein-coding Genes
4571 genes
Non-Coding Genes
468 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arabinose abc transporter permease arah | YDC107_RS02085 | Not Available | Negative | 394358 - 395344 | 34213.1 |
| arabinose abc transporter atp-binding protein arag | YDC107_RS02090 | Not Available | Negative | 395359 - 396873 | 55021.6 |
| arabinose abc transporter substrate-binding protein araf | YDC107_RS02095 | Not Available | Negative | 396943 - 397932 | 35542.9 |
| non-heme ferritin-like protein | YDC107_RS02100 | Not Available | Positive | 398728 - 399231 | 18895.6 |
| duf2766 family protein yecj | YDC107_RS02105 | Not Available | Negative | 399311 - 399562 | 9123.11 |
| stress response protein azuc | YDC107_RS02110 | Not Available | Negative | 399677 - 399763 | 3408.36 |
| yecr-like lipofamily protein | YDC107_RS02115 | Not Available | Positive | 400025 - 400348 | 11773.2 |
| non-heme ferritin | YDC107_RS02120 | Not Available | Positive | 400519 - 401016 | 19424.9 |
| yech family metal-binding protein | YDC107_RS02125 | Not Available | Negative | 401054 - 401293 | 8674.25 |
| tyrosine transporter tyrp | YDC107_RS02130 | Not Available | Positive | 401485 - 402696 | 42735.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





