Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain YDC107 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1284644 bp
Thymine Count
1281806 bp
Guanine Count
1314426 bp
Cytosine Count
1317435 bp
Genome Length
5198311 bp
Protein-coding Genes
4571 genes
Non-Coding Genes
468 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| leucine efflux protein leue | YDC107_RS01590 | Not Available | Negative | 293346 - 293984 | 23259.0 |
| dna-binding transcriptional regulator dmlr | YDC107_RS01595 | Not Available | Negative | 294111 - 295034 | 34676.9 |
| multifunctional d-malate/3-isopropylmalate/tartarate dehydrogenase | YDC107_RS01600 | Not Available | Positive | 295137 - 296222 | 40306.2 |
| bcct family transporter yeav | YDC107_RS01605 | Not Available | Positive | 296473 - 298083 | 58666.4 |
| carnitine monooxygenase, oxygenase subunit yeaw | YDC107_RS01610 | Not Available | Positive | 298115 - 299239 | 42547.0 |
| s49 family peptidase | YDC107_RS01615 | Not Available | Positive | 299295 - 300259 | 35843.8 |
| ribonuclease d | YDC107_RS01620 | Not Available | Negative | 300306 - 301421 | 42169.9 |
| long-chain-fatty-acid--coa ligase fadd | YDC107_RS01625 | Not Available | Negative | 301503 - 303188 | 62335.7 |
| slp family lipoprotein yeay | YDC107_RS01630 | Not Available | Negative | 303393 - 303974 | 20981.4 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex dimerization subunit type 1 tsab | YDC107_RS01635 | Not Available | Negative | 304013 - 304708 | 25131.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





