Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain YDC107 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1284644 bp
Thymine Count
1281806 bp
Guanine Count
1314426 bp
Cytosine Count
1317435 bp
Genome Length
5198311 bp
Protein-coding Genes
4571 genes
Non-Coding Genes
468 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-hexose-6-phosphate mutarotase | YDC107_RS01490 | Not Available | Positive | 277071 - 277955 | 32687.8 |
| methylglyoxal reductase yeae | YDC107_RS01495 | Not Available | Negative | 278006 - 278860 | 31057.6 |
| scaffolding protein mipa | YDC107_RS01500 | Not Available | Negative | 278950 - 279696 | 27832.4 |
| protein kinase yeag | YDC107_RS01505 | Not Available | Positive | 280133 - 282067 | 74484.3 |
| yeah/yhbh family protein | YDC107_RS01510 | Not Available | Positive | 282180 - 283463 | 49453.2 |
| ggdef domain-containing protein | YDC107_RS01515 | Not Available | Positive | 283610 - 285085 | 56042.6 |
| diguanylate cyclase dgcj | YDC107_RS01520 | Not Available | Positive | 285266 - 286756 | 56659.8 |
| mischarged aminoacyl-trna deacylase | YDC107_RS01525 | Not Available | Positive | 286799 - 287302 | 17851.7 |
| small membrane protein yoai | YDC107_RS01530 | Not Available | Negative | 287303 - 287407 | 3771.77 |
| duf441 domain-containing protein | YDC107_RS01535 | Not Available | Positive | 287577 - 288023 | 15256.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





