Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain YDC107 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1284644 bp
Thymine Count
1281806 bp
Guanine Count
1314426 bp
Cytosine Count
1317435 bp
Genome Length
5198311 bp
Protein-coding Genes
4571 genes
Non-Coding Genes
468 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cystine/sulfocysteine:cation symporter | YDC107_RS01240 | Not Available | Positive | 225573 - 226964 | 48805.9 |
| hypothetical protein | YDC107_RS01245 | Not Available | Negative | 226968 - 227771 | 30210.4 |
| cell division activator ceda | YDC107_RS01250 | Not Available | Negative | 228060 - 228323 | 10201.5 |
| catalase hpii | YDC107_RS01255 | Not Available | Positive | 228506 - 230767 | 84208.1 |
| chitin disaccharide deacetylase | YDC107_RS01260 | Not Available | Negative | 230814 - 231572 | 28137.6 |
| 6-phospho-beta-glucosidase | YDC107_RS01265 | Not Available | Negative | 231585 - 232937 | 50427.3 |
| transcriptional regulator chbr | YDC107_RS01270 | Not Available | Negative | 233042 - 233884 | 32999.4 |
| pts n,n'-diacetylchitobiose transporter subunit iia | YDC107_RS01275 | Not Available | Negative | 233892 - 234242 | 12730.5 |
| pts n,n'-diacetylchitobiose transporter subunit iic | YDC107_RS01280 | Not Available | Negative | 234293 - 235651 | 48351.2 |
| pts n,n'-diacetylchitobiose transporter subunit iib | YDC107_RS01285 | Not Available | Negative | 235736 - 236056 | 11427.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





