Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain YDC107 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1284644 bp
Thymine Count
1281806 bp
Guanine Count
1314426 bp
Cytosine Count
1317435 bp
Genome Length
5198311 bp
Protein-coding Genes
4571 genes
Non-Coding Genes
468 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ydil family protein | YDC107_RS01040 | Not Available | Positive | 185405 - 185761 | 13961.6 |
| mfs transporter | YDC107_RS01045 | Not Available | Positive | 185860 - 187074 | 44582.6 |
| mfs transporter | YDC107_RS01050 | Not Available | Positive | 187301 - 188566 | 46054.9 |
| quinate/shikimate dehydrogenase | YDC107_RS01055 | Not Available | Positive | 188578 - 189444 | 31229.6 |
| type i 3-dehydroquinate dehydratase | YDC107_RS01060 | Not Available | Positive | 189475 - 190233 | 27484.2 |
| acyl coa:acetate/3-ketoacid coa transferase | YDC107_RS01065 | Not Available | Positive | 190377 - 191972 | 57602.7 |
| acyl-coa dehydrogenase | YDC107_RS01070 | Not Available | Positive | 191986 - 193137 | 42985.5 |
| arac family transcriptional regulator | YDC107_RS01075 | Not Available | Negative | 193180 - 194091 | 34868.2 |
| electron transfer flavoprotein | YDC107_RS01080 | Not Available | Positive | 194407 - 195171 | 27448.0 |
| electron transfer flavoprotein subunit alpha | YDC107_RS01085 | Not Available | Positive | 195191 - 196129 | 33845.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





