Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain YDC107 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1284644 bp
Thymine Count
1281806 bp
Guanine Count
1314426 bp
Cytosine Count
1317435 bp
Genome Length
5198311 bp
Protein-coding Genes
4571 genes
Non-Coding Genes
468 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator slya | YDC107_RS00795 | Not Available | Negative | 135156 - 135590 | 16381.1 |
| duf1656 domain-containing protein | YDC107_RS00800 | Not Available | Positive | 135791 - 136027 | 8891.33 |
| hlyd family secretion protein | YDC107_RS00805 | Not Available | Positive | 136030 - 136887 | 31595.7 |
| fusc family protein | YDC107_RS00810 | Not Available | Positive | 136887 - 138899 | 75345.1 |
| superoxide dismutase | YDC107_RS00815 | Not Available | Negative | 138900 - 139421 | 17682.0 |
| aldo/keto reductase | YDC107_RS00820 | Not Available | Negative | 139502 - 140398 | 33677.6 |
| duf1289 domain-containing protein | YDC107_RS00825 | Not Available | Negative | 140447 - 140686 | 9359.15 |
| dna-binding transcriptional regulator nemr | YDC107_RS00830 | Not Available | Positive | 140789 - 141388 | 22217.6 |
| n-ethylmaleimide reductase | YDC107_RS00835 | Not Available | Positive | 141425 - 142522 | 39562.7 |
| lactoylglutathione lyase | YDC107_RS00840 | Not Available | Positive | 142603 - 143010 | 14920.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





