Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain YDC107 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1284644 bp
Thymine Count
1281806 bp
Guanine Count
1314426 bp
Cytosine Count
1317435 bp
Genome Length
5198311 bp
Protein-coding Genes
4571 genes
Non-Coding Genes
468 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adenosine deaminase | YDC107_RS00695 | Not Available | Positive | 116974 - 117975 | 36399.6 |
| oxidoreductase | YDC107_RS00700 | Not Available | Negative | 118030 - 119070 | 38258.6 |
| division septum protein blr | YDC107_RS00705 | Not Available | Positive | 119313 - 119438 | 4600.64 |
| transcription modulator ydgt | YDC107_RS00710 | Not Available | Positive | 119711 - 119926 | 8417.05 |
| duf2569 domain-containing protein | YDC107_RS00715 | Not Available | Positive | 120012 - 120452 | 16409.6 |
| electron transport complex subunit rsxa | YDC107_RS00720 | Not Available | Positive | 120529 - 121110 | 20898.8 |
| electron transport complex subunit rsxb | YDC107_RS00725 | Not Available | Positive | 121110 - 121688 | 20544.9 |
| electron transport complex subunit rsxc | YDC107_RS00730 | Not Available | Positive | 121681 - 123903 | 80331.1 |
| electron transport complex subunit rsxd | YDC107_RS00735 | Not Available | Positive | 123904 - 124962 | 38204.4 |
| electron transport complex subunit rsxg | YDC107_RS00740 | Not Available | Positive | 124966 - 125586 | 21959.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





