Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain YDC107 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1284644 bp
Thymine Count
1281806 bp
Guanine Count
1314426 bp
Cytosine Count
1317435 bp
Genome Length
5198311 bp
Protein-coding Genes
4571 genes
Non-Coding Genes
468 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mannose-6-phosphate isomerase | YDC107_RS00645 | Not Available | Positive | 103489 - 104664 | 42758.2 |
| ydga family protein | YDC107_RS00650 | Not Available | Positive | 104765 - 106273 | 54700.2 |
| glucuronide uptake porin uidc | YDC107_RS00655 | Not Available | Negative | 106319 - 107584 | 46620.2 |
| glucuronide transporter | YDC107_RS00660 | Not Available | Negative | 107623 - 108996 | 50029.1 |
| beta-glucuronidase | YDC107_RS00665 | Not Available | Negative | 108993 - 110804 | 68540.7 |
| dna-binding transcriptional regulator uidr | YDC107_RS00670 | Not Available | Negative | 111195 - 111785 | 21800.5 |
| 7-alpha-hydroxysteroid dehydrogenase | YDC107_RS00675 | Not Available | Negative | 112014 - 112781 | 26766.1 |
| mal regulon transcriptional regulator mali | YDC107_RS00680 | Not Available | Negative | 112893 - 113921 | 36657.9 |
| pts maltose transporter subunit iicb | YDC107_RS00685 | Not Available | Positive | 114096 - 115688 | 56616.5 |
| bifunctional maltose regulon transcriptional repressor/cystathionine beta-lyase maly | YDC107_RS00690 | Not Available | Positive | 115698 - 116870 | 43639.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





