Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain YDC107 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1284644 bp
Thymine Count
1281806 bp
Guanine Count
1314426 bp
Cytosine Count
1317435 bp
Genome Length
5198311 bp
Protein-coding Genes
4571 genes
Non-Coding Genes
468 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| muramoyltetrapeptide carboxypeptidase | YDC107_RS23080 | Not Available | Negative | 4731692 - 4732606 | 33571.4 |
| membrane-bound lytic murein transglycosylase emta | YDC107_RS23085 | Not Available | Positive | 4732706 - 4733317 | 22213.7 |
| flagellar brake protein ycgr | YDC107_RS23090 | Not Available | Negative | 4733319 - 4734053 | 27826.7 |
| glsb/yeaq/ymge family stress response membrane protein | YDC107_RS23095 | Not Available | Positive | 4734254 - 4734508 | 8703.27 |
| tonb-dependent receptor plug domain-containing protein | YDC107_RS23100 | Not Available | Negative | 4734558 - 4736528 | 73490.0 |
| modd protein | YDC107_RS23105 | Not Available | Negative | 4736554 - 4737408 | 30567.9 |
| class i sam-dependent methyltransferase | YDC107_RS23110 | Not Available | Negative | 4737405 - 4738217 | 30819.3 |
| abc transporter atp-binding protein | YDC107_RS23115 | Not Available | Negative | 4738227 - 4738985 | 27447.7 |
| feccd family abc transporter permease | YDC107_RS23120 | Not Available | Negative | 4738982 - 4739962 | 34862.1 |
| iron abc transporter substrate-binding protein | YDC107_RS23125 | Not Available | Negative | 4739962 - 4740984 | 37731.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





