Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain YDC107 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1284644 bp
Thymine Count
1281806 bp
Guanine Count
1314426 bp
Cytosine Count
1317435 bp
Genome Length
5198311 bp
Protein-coding Genes
4571 genes
Non-Coding Genes
468 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cell division topological specificity factor mine | YDC107_RS22985 | Not Available | Negative | 4712080 - 4712346 | 10235.5 |
| septum site-determining protein mind | YDC107_RS22990 | Not Available | Negative | 4712350 - 4713162 | 29615.8 |
| septum site-determining protein minc | YDC107_RS22995 | Not Available | Negative | 4713186 - 4713881 | 24746.9 |
| ycgj family protein | YDC107_RS23000 | Not Available | Positive | 4714401 - 4714769 | 13415.2 |
| g-type lysoyme inhibitor plig | YDC107_RS23005 | Not Available | Negative | 4714889 - 4715290 | 14807.5 |
| hypothetical protein | YDC107_RS28155 | Not Available | Positive | 4715361 - 4715519 | 5582.75 |
| ycgl domain-containing protein | YDC107_RS23010 | Not Available | Positive | 4715531 - 4715824 | 11247.7 |
| fumarylacetoacetate hydrolase family protein | YDC107_RS23015 | Not Available | Positive | 4715896 - 4716555 | 23682.4 |
| ycgn family cysteine cluster protein | YDC107_RS23020 | Not Available | Positive | 4716647 - 4717093 | 17329.5 |
| hemolysin hlye | YDC107_RS23025 | Not Available | Negative | 4717300 - 4718211 | 33733.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





