Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain YDC107 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1284644 bp
Thymine Count
1281806 bp
Guanine Count
1314426 bp
Cytosine Count
1317435 bp
Genome Length
5198311 bp
Protein-coding Genes
4571 genes
Non-Coding Genes
468 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein ymgc | YDC107_RS22935 | Not Available | Positive | 4701446 - 4701694 | 9667.82 |
| cyclic diguanylate phosphodiesterase | YDC107_RS22940 | Not Available | Positive | 4702030 - 4703553 | 57043.3 |
| cell division-associated protein ymgf | YDC107_RS22945 | Not Available | Positive | 4703685 - 4703903 | 8228.32 |
| autotransporter ycgh | YDC107_RS22950 | Not Available | Positive | 4704303 - 4706966 | 94984.2 |
| ymgd family protein | YDC107_RS22955 | Not Available | Negative | 4707022 - 4707357 | 12114.9 |
| ymgg-like glycine zipper-containing protein | YDC107_RS22960 | Not Available | Negative | 4707361 - 4707705 | 10807.6 |
| protein ymgi | YDC107_RS22965 | Not Available | Negative | 4707707 - 4707880 | 6518.21 |
| protein ymgj | YDC107_RS22970 | Not Available | Positive | 4707981 - 4708166 | 7391.39 |
| hypothetical protein | YDC107_RS22975 | Not Available | Positive | 4708127 - 4708246 | 4155.98 |
| adhesin-like autotransporter ypja/ehad | YDC107_RS22980 | Not Available | Positive | 4708311 - 4711715 | 117493.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





