Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain YDC107 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1284644 bp
Thymine Count
1281806 bp
Guanine Count
1314426 bp
Cytosine Count
1317435 bp
Genome Length
5198311 bp
Protein-coding Genes
4571 genes
Non-Coding Genes
468 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| curli production assembly/transport protein csgf | YDC107_RS22050 | Not Available | Negative | 4550249 - 4550665 | 15072.7 |
| curli production assembly/transport protein csge | YDC107_RS22055 | Not Available | Negative | 4550690 - 4551079 | 14879.6 |
| biofilm master transcriptional regulator csgd | YDC107_RS22060 | Not Available | Negative | 4551084 - 4551734 | 24931.0 |
| curli minor subunit csgb | YDC107_RS22065 | Not Available | Positive | 4552478 - 4552933 | 15909.8 |
| curli major subunit csga | YDC107_RS22070 | Not Available | Positive | 4552974 - 4553429 | 14993.0 |
| curli assembly chaperone csgc | YDC107_RS22075 | Not Available | Positive | 4553488 - 4553820 | 11969.4 |
| type 1 fimbrial protein | YDC107_RS22080 | Not Available | Positive | 4553941 - 4554252 | 11227.7 |
| o-acetyl-adp-ribose deacetylase | YDC107_RS22085 | Not Available | Positive | 4554347 - 4554880 | 18881.5 |
| cardiolipin synthase clsc | YDC107_RS22090 | Not Available | Positive | 4554822 - 4556303 | 55905.6 |
| glucans biosynthesis protein mdoc | YDC107_RS22095 | Not Available | Negative | 4556311 - 4557468 | 44763.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





