Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain YDC107 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1284644 bp
Thymine Count
1281806 bp
Guanine Count
1314426 bp
Cytosine Count
1317435 bp
Genome Length
5198311 bp
Protein-coding Genes
4571 genes
Non-Coding Genes
468 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fimbrial protein | YDC107_RS21600 | Not Available | Positive | 4457401 - 4457883 | 16701.3 |
| molecular chaperone | YDC107_RS21605 | Not Available | Positive | 4457966 - 4458667 | 25430.9 |
| fimbrial biogenesis usher protein | YDC107_RS21610 | Not Available | Positive | 4458692 - 4461292 | 95228.0 |
| fimbrial protein | YDC107_RS21615 | Not Available | Positive | 4461283 - 4462353 | 37938.8 |
| fimbrial protein | YDC107_RS21620 | Not Available | Positive | 4462365 - 4462907 | 18996.7 |
| fimbrial protein | YDC107_RS21625 | Not Available | Positive | 4462915 - 4463430 | 18401.9 |
| fimbrial chaperone | YDC107_RS21630 | Not Available | Positive | 4463396 - 4464133 | 27006.8 |
| quinone-dependent dihydroorotate dehydrogenase | YDC107_RS21635 | Not Available | Positive | 4464244 - 4465254 | 36791.7 |
| cell division protein zapc | YDC107_RS21640 | Not Available | Positive | 4465428 - 4465970 | 20647.9 |
| 6-n-hydroxylaminopurine resistance protein ycbx | YDC107_RS21645 | Not Available | Negative | 4465967 - 4467076 | 40607.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





