Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain YDC107 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1284644 bp
Thymine Count
1281806 bp
Guanine Count
1314426 bp
Cytosine Count
1317435 bp
Genome Length
5198311 bp
Protein-coding Genes
4571 genes
Non-Coding Genes
468 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arginine abc transporter substrate-binding protein artj | YDC107_RS21180 | Not Available | Negative | 4357936 - 4358667 | 26866.9 |
| arginine abc transporter permease artm | YDC107_RS21185 | Not Available | Negative | 4358893 - 4359561 | 24887.2 |
| arginine abc transporter permease artq | YDC107_RS21190 | Not Available | Negative | 4359561 - 4360277 | 26250.7 |
| arginine abc transporter substrate-binding protein arti | YDC107_RS21195 | Not Available | Negative | 4360284 - 4361015 | 26961.0 |
| arginine abc transporter atp-binding protein artp | YDC107_RS21200 | Not Available | Negative | 4361033 - 4361761 | 27053.7 |
| lipoprotein | YDC107_RS21205 | Not Available | Negative | 4361979 - 4362494 | 18906.2 |
| s49 family peptidase | YDC107_RS21215 | Not Available | Positive | 4363142 - 4364347 | 46132.4 |
| heavy metal-binding domain-containing protein | YDC107_RS21225 | Not Available | Positive | 4365122 - 4365445 | 11465.7 |
| n-acetylmuramoyl-l-alanine amidase amid | YDC107_RS21230 | Not Available | Positive | 4365442 - 4366272 | 31099.2 |
| nad-dependent epimerase/dehydratase family protein | YDC107_RS21235 | Not Available | Negative | 4366269 - 4367282 | 38087.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





