Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain YDC107 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1284644 bp
Thymine Count
1281806 bp
Guanine Count
1314426 bp
Cytosine Count
1317435 bp
Genome Length
5198311 bp
Protein-coding Genes
4571 genes
Non-Coding Genes
468 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | YDC107_RS20780 | Not Available | Positive | 4273469 - 4273858 | 14589.1 |
| lysylphosphatidylglycerol synthase transmembrane domain-containing protein | YDC107_RS20785 | Not Available | Negative | 4273894 - 4274850 | 35836.4 |
| cardiolipin synthase clsb | YDC107_RS20790 | Not Available | Negative | 4274850 - 4276091 | 47617.2 |
| endonuclease/exonuclease/phosphatase family protein | YDC107_RS20795 | Not Available | Negative | 4276088 - 4276849 | 28791.4 |
| ybhq family protein | YDC107_RS20800 | Not Available | Positive | 4276982 - 4277392 | 15465.6 |
| abc transporter permease | YDC107_RS20805 | Not Available | Negative | 4277354 - 4278460 | 41568.2 |
| abc transporter permease | YDC107_RS20810 | Not Available | Negative | 4278471 - 4279604 | 42120.4 |
| atp-binding cassette domain-containing protein | YDC107_RS20815 | Not Available | Negative | 4279597 - 4281333 | 63105.3 |
| secretion protein hlyd | YDC107_RS20820 | Not Available | Negative | 4281326 - 4282321 | 36234.6 |
| dna-binding transcriptional regulator cecr | YDC107_RS20825 | Not Available | Negative | 4282324 - 4282995 | 24949.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





