Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain YDC107 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1284644 bp
Thymine Count
1281806 bp
Guanine Count
1314426 bp
Cytosine Count
1317435 bp
Genome Length
5198311 bp
Protein-coding Genes
4571 genes
Non-Coding Genes
468 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| galactose-1-phosphate uridylyltransferase | YDC107_RS20630 | Not Available | Negative | 4242264 - 4243310 | 39624.7 |
| udp-glucose 4-epimerase gale | YDC107_RS20635 | Not Available | Negative | 4243320 - 4244336 | 37240.2 |
| molybdate abc transporter atp-binding protein modf | YDC107_RS20640 | Not Available | Negative | 4244599 - 4246071 | 54521.1 |
| molybdenum-dependent transcriptional regulator | YDC107_RS20645 | Not Available | Negative | 4246139 - 4246927 | 28282.9 |
| multidrug efflux pump accessory protein acrz | YDC107_RS20650 | Not Available | Positive | 4247056 - 4247205 | 5300.82 |
| molybdate abc transporter substrate-binding protein | YDC107_RS20655 | Not Available | Positive | 4247371 - 4248144 | 27383.5 |
| molybdate abc transporter permease subunit | YDC107_RS20660 | Not Available | Positive | 4248144 - 4248833 | 24940.3 |
| molybdenum abc transporter atp-binding protein modc | YDC107_RS20665 | Not Available | Positive | 4248836 - 4249894 | 39104.8 |
| bifunctional pyridoxal phosphate/fructose-1,6-bisphosphate phosphatase | YDC107_RS20670 | Not Available | Negative | 4249895 - 4250713 | 30169.9 |
| 6-phosphogluconolactonase | YDC107_RS20675 | Not Available | Positive | 4250868 - 4251863 | 36309.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





