Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain YDC107 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1284644 bp
Thymine Count
1281806 bp
Guanine Count
1314426 bp
Cytosine Count
1317435 bp
Genome Length
5198311 bp
Protein-coding Genes
4571 genes
Non-Coding Genes
468 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Tail fiber protein | YDC107_RS25275 | Not Available | Negative | 5180913 - 5183312 | 84288.7 |
| Lom protein | YDC107_RS25280 | Not Available | Negative | 5183377 - 5183976 | 21851.3 |
| Putative tail tip assembly protein | YDC107_RS25285 | Not Available | Negative | 5184044 - 5187523 | 127247.0 |
| Putative tail component | YDC107_RS25290 | Not Available | Negative | 5187584 - 5188186 | 21317.0 |
| Tail fiber component | YDC107_RS25295 | Not Available | Negative | 5188123 - 5188866 | 28234.2 |
| Tail component | YDC107_RS25300 | Not Available | Negative | 5188872 - 5189570 | 25699.0 |
| Tail component | YDC107_RS25305 | Not Available | Negative | 5189570 - 5189899 | 12487.0 |
| Tail component | YDC107_RS25310 | Not Available | Negative | 5189896 - 5192457 | 92492.0 |
| Tail component | YDC107_RS25315 | Not Available | Negative | 5192450 - 5192884 | 16092.0 |
| Tail component | YDC107_RS25320 | Not Available | Negative | 5192866 - 5193288 | 15608.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





