Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain YDC107 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1284644 bp
Thymine Count
1281806 bp
Guanine Count
1314426 bp
Cytosine Count
1317435 bp
Genome Length
5198311 bp
Protein-coding Genes
4571 genes
Non-Coding Genes
468 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-leu | Not Available | Not Available | Positive | 4138891 - 4138975 | Not Available |
| Trna-met | Not Available | Not Available | Positive | 4138984 - 4139060 | Not Available |
| asparagine synthase b | YDC107_RS20135 | Not Available | Negative | 4139440 - 4141104 | 62646.3 |
| ribonucleotide monophosphatase nagd | YDC107_RS20140 | Not Available | Negative | 4141361 - 4142113 | 27164.6 |
| dna-binding transcriptional regulator nagc | YDC107_RS20145 | Not Available | Negative | 4142161 - 4143381 | 44544.0 |
| n-acetylglucosamine-6-phosphate deacetylase | YDC107_RS20150 | Not Available | Negative | 4143390 - 4144538 | 41007.6 |
| glucosamine-6-phosphate deaminase | YDC107_RS20155 | Not Available | Negative | 4144598 - 4145398 | 29775.9 |
| pts n-acetyl glucosamine transporter subunit iiabc | YDC107_RS20160 | Not Available | Positive | 4145731 - 4147677 | 68333.9 |
| is200/is605-like element is200c family transposase | YDC107_RS20165 | Not Available | Positive | 4147901 - 4148359 | 18028.0 |
| glutamine--trna ligase | YDC107_RS20170 | Not Available | Positive | 4148592 - 4150256 | 63520.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





