Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain YDC107 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1284644 bp
Thymine Count
1281806 bp
Guanine Count
1314426 bp
Cytosine Count
1317435 bp
Genome Length
5198311 bp
Protein-coding Genes
4571 genes
Non-Coding Genes
468 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cnnm family magnesium/cobalt transport protein corc | YDC107_RS20075 | Not Available | Negative | 4132833 - 4133711 | 33300.4 |
| rrna maturation rnase ybey | YDC107_RS20080 | Not Available | Negative | 4133801 - 4134268 | 17526.6 |
| phoh family protein | YDC107_RS20085 | Not Available | Negative | 4134265 - 4135305 | 39041.0 |
| trna (n6-isopentenyl adenosine(37)-c2)-methylthiotransferase miab | YDC107_RS20090 | Not Available | Negative | 4135458 - 4136882 | 53666.0 |
| 3-demethoxyubiquinol 3-hydroxylase | YDC107_RS20095 | Not Available | Positive | 4137028 - 4138203 | 42937.0 |
| Trna-gln | Not Available | Not Available | Positive | 4138357 - 4138431 | Not Available |
| Trna-gln | Not Available | Not Available | Positive | 4138469 - 4138543 | Not Available |
| Trna-met | Not Available | Not Available | Positive | 4138592 - 4138668 | Not Available |
| Trna-gln | Not Available | Not Available | Positive | 4138684 - 4138758 | Not Available |
| Trna-gln | Not Available | Not Available | Positive | 4138793 - 4138867 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





