Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain YDC107 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1284644 bp
Thymine Count
1281806 bp
Guanine Count
1314426 bp
Cytosine Count
1317435 bp
Genome Length
5198311 bp
Protein-coding Genes
4571 genes
Non-Coding Genes
468 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| universal stress protein uspg | YDC107_RS19875 | Not Available | Negative | 4093826 - 4094254 | 15937.1 |
| nucleoside diphosphate kinase regulator | YDC107_RS19880 | Not Available | Negative | 4094610 - 4095020 | 14928.0 |
| ribonuclease i | YDC107_RS19885 | Not Available | Negative | 4095250 - 4096056 | 29591.0 |
| citrate/succinate antiporter citt | YDC107_RS19890 | Not Available | Negative | 4096170 - 4097633 | 53095.7 |
| triphosphoribosyl-dephospho-coa synthase citg | YDC107_RS19895 | Not Available | Negative | 4097683 - 4098561 | 31731.5 |
| citrate lyase holo-[acyl-carrier protein] synthase | YDC107_RS19900 | Not Available | Negative | 4098536 - 4099087 | 20271.5 |
| citrate lyase subunit alpha | YDC107_RS19905 | Not Available | Negative | 4099091 - 4100623 | 55194.0 |
| citrate (pro-3s)-lyase subunit beta | YDC107_RS19910 | Not Available | Negative | 4100634 - 4101542 | 33123.7 |
| citrate lyase acyl carrier protein | YDC107_RS19915 | Not Available | Negative | 4101539 - 4101835 | 10689.9 |
| [citrate (pro-3s)-lyase] ligase | YDC107_RS19920 | Not Available | Negative | 4101850 - 4102908 | 40079.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





