Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain YDC107 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1284644 bp
Thymine Count
1281806 bp
Guanine Count
1314426 bp
Cytosine Count
1317435 bp
Genome Length
5198311 bp
Protein-coding Genes
4571 genes
Non-Coding Genes
468 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Putative tail component | YDC107_RS24290 | Not Available | Positive | 4959731 - 4960333 | 21317.0 |
| Putative tail tip assembly protein | YDC107_RS24295 | Not Available | Positive | 4960394 - 4963873 | 127247.0 |
| Lom protein | YDC107_RS24300 | Not Available | Positive | 4963941 - 4964540 | 21851.3 |
| Tail fiber protein | YDC107_RS24305 | Not Available | Positive | 4964605 - 4966980 | 82930.9 |
| Hypothetical protein | YDC107_RS24310 | Not Available | Positive | 4966980 - 4967261 | 10685.5 |
| Tail fiber protein | YDC107_RS24315 | Not Available | Positive | 4967271 - 4968311 | 38066.5 |
| Hypothetical protein | YDC107_RS24320 | Not Available | Positive | 4968354 - 4968647 | 10949.4 |
| Attr | Not Available | Not Available | Positive | 4974122 - 4974133 | Not Available |
| Hypothetical protein | YDC107_RS25215 | Not Available | Positive | 5172693 - 5173439 | 27250.5 |
| dna-binding transcriptional regulator rspr | YDC107_RS25220 | Not Available | Positive | 5173528 - 5174214 | 26580.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





