Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain YDC107 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1284644 bp
Thymine Count
1281806 bp
Guanine Count
1314426 bp
Cytosine Count
1317435 bp
Genome Length
5198311 bp
Protein-coding Genes
4571 genes
Non-Coding Genes
468 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxy-2-oxovalerate aldolase | YDC107_RS18605 | Not Available | Positive | 3801904 - 3802917 | 36442.6 |
| 3-(3-hydroxy-phenyl)propionate transporter mhpt | YDC107_RS18610 | Not Available | Positive | 3803097 - 3804308 | 41627.6 |
| duf2058 domain-containing protein | YDC107_RS18615 | Not Available | Positive | 3804410 - 3804949 | 19937.9 |
| s-formylglutathione hydrolase | YDC107_RS18620 | Not Available | Negative | 3805074 - 3805907 | 31402.1 |
| s-(hydroxymethyl)glutathione dehydrogenase | YDC107_RS18625 | Not Available | Negative | 3806001 - 3807110 | 39335.2 |
| formaldehyde-responsive transcriptional repressor frmr | YDC107_RS18630 | Not Available | Negative | 3807145 - 3807420 | 10318.3 |
| yaio family outer membrane beta-barrel protein | YDC107_RS18635 | Not Available | Negative | 3807605 - 3808378 | 29058.8 |
| acetyltransferase | YDC107_RS18640 | Not Available | Negative | 3808380 - 3808961 | 20773.3 |
| glycosyltransferase | YDC107_RS18645 | Not Available | Negative | 3808939 - 3810135 | 44645.9 |
| pig-l deacetylase family protein | YDC107_RS18650 | Not Available | Negative | 3810145 - 3810816 | 25041.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





