Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain YDC107 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1284644 bp
Thymine Count
1281806 bp
Guanine Count
1314426 bp
Cytosine Count
1317435 bp
Genome Length
5198311 bp
Protein-coding Genes
4571 genes
Non-Coding Genes
468 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta hydrolase | YDC107_RS18200 | Not Available | Positive | 3709964 - 3711022 | 38709.7 |
| mfs transporter | YDC107_RS18205 | Not Available | Positive | 3711164 - 3712291 | 39320.7 |
| molybdenum cofactor insertion chaperone paod | YDC107_RS18210 | Not Available | Negative | 3712470 - 3713423 | 34761.8 |
| aldehyde oxidoreductase molybdenum-binding subunit paoc | YDC107_RS18215 | Not Available | Negative | 3713433 - 3715631 | 78111.8 |
| aldehyde oxidoreductase fad-binding subunit paob | YDC107_RS18220 | Not Available | Negative | 3715628 - 3716584 | 33888.8 |
| aldehyde dehydrogenase iron-sulfur subunit paoa | YDC107_RS18225 | Not Available | Negative | 3716581 - 3717270 | 24429.2 |
| yagu family protein | YDC107_RS18230 | Not Available | Positive | 3717677 - 3718291 | 22968.1 |
| ykgj family cysteine cluster protein | YDC107_RS18235 | Not Available | Negative | 3718540 - 3718869 | 11799.1 |
| fimbrial chaperone ecpe | YDC107_RS18240 | Not Available | Negative | 3719183 - 3719893 | 26660.7 |
| fimbrial adhesin ecpd | YDC107_RS18245 | Not Available | Negative | 3719862 - 3721505 | 59862.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





