Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain YDC107 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1284644 bp
Thymine Count
1281806 bp
Guanine Count
1314426 bp
Cytosine Count
1317435 bp
Genome Length
5198311 bp
Protein-coding Genes
4571 genes
Non-Coding Genes
468 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytosol nonspecific dipeptidase | YDC107_RS17890 | Not Available | Negative | 3647254 - 3648711 | 52920.4 |
| xanthine phosphoribosyltransferase | YDC107_RS17895 | Not Available | Positive | 3648972 - 3649430 | 16971.6 |
| esterase frsa | YDC107_RS17900 | Not Available | Positive | 3649522 - 3650766 | 47025.4 |
| sigma factor-binding protein crl | YDC107_RS17905 | Not Available | Positive | 3650824 - 3651225 | 15614.6 |
| phosphoporin phoe | YDC107_RS17910 | Not Available | Negative | 3651264 - 3652319 | 38968.1 |
| glutamate 5-kinase | YDC107_RS17915 | Not Available | Positive | 3652607 - 3653710 | 39058.9 |
| glutamate-5-semialdehyde dehydrogenase | YDC107_RS17920 | Not Available | Positive | 3653722 - 3654975 | 44690.7 |
| Trna-thr | Not Available | Not Available | Positive | 3655090 - 3655165 | Not Available |
| hypothetical protein | YDC107_RS17930 | Not Available | Positive | 3655491 - 3656072 | 21483.4 |
| hypothetical protein | YDC107_RS17940 | Not Available | Negative | 3656159 - 3657790 | 63691.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





