Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain YDC107 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1284644 bp
Thymine Count
1281806 bp
Guanine Count
1314426 bp
Cytosine Count
1317435 bp
Genome Length
5198311 bp
Protein-coding Genes
4571 genes
Non-Coding Genes
468 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphate-starvation-inducible protein psie | YDC107_RS14095 | Not Available | Positive | 2889208 - 2889618 | 15597.7 |
| maltose abc transporter permease malg | YDC107_RS14100 | Not Available | Negative | 2889712 - 2890602 | 32227.3 |
| maltose abc transporter permease malf | YDC107_RS14105 | Not Available | Negative | 2890617 - 2892161 | 57016.6 |
| maltose/maltodextrin abc transporter substrate-binding protein male | YDC107_RS14110 | Not Available | Negative | 2892315 - 2893505 | 43397.9 |
| maltose/maltodextrin abc transporter atp-binding protein malk | YDC107_RS14115 | Not Available | Positive | 2893870 - 2894985 | 40993.0 |
| maltoporin lamb | YDC107_RS14120 | Not Available | Positive | 2895057 - 2896397 | 49930.8 |
| maltose operon protein malm | YDC107_RS14125 | Not Available | Positive | 2896640 - 2897560 | 31917.2 |
| sopa family protein | YDC107_RS14130 | Not Available | Positive | 2897789 - 2899369 | 61454.2 |
| chorismate lyase | YDC107_RS14135 | Not Available | Positive | 2899592 - 2900089 | 18826.0 |
| 4-hydroxybenzoate octaprenyltransferase | YDC107_RS14140 | Not Available | Positive | 2900102 - 2900974 | 32513.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





