Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain YDC107 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1284644 bp
Thymine Count
1281806 bp
Guanine Count
1314426 bp
Cytosine Count
1317435 bp
Genome Length
5198311 bp
Protein-coding Genes
4571 genes
Non-Coding Genes
468 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Tail fiber protein | YDC107_RS00135 | Not Available | Negative | 20632 - 23010 | 82843.7 |
| Lom protein | YDC107_RS00140 | Not Available | Negative | 23075 - 23674 | 21879.3 |
| Putative tail tip assembly protein | YDC107_RS00145 | Not Available | Negative | 23742 - 27221 | 127093.0 |
| Tail component | YDC107_RS00150 | Not Available | Negative | 27282 - 27854 | 19489.6 |
| Tail fiber component | YDC107_RS00155 | Not Available | Negative | 27851 - 28594 | 28265.3 |
| Tail component | YDC107_RS00160 | Not Available | Negative | 28600 - 29298 | 25636.9 |
| Tail component | YDC107_RS00165 | Not Available | Negative | 29298 - 29627 | 12458.9 |
| Tail component | YDC107_RS00170 | Not Available | Negative | 29624 - 32203 | 92989.7 |
| Tail component | YDC107_RS00175 | Not Available | Negative | 32196 - 32630 | 16106.0 |
| Tail component | YDC107_RS00180 | Not Available | Negative | 32612 - 33025 | 15230.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





