Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain YDC107 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1284644 bp
Thymine Count
1281806 bp
Guanine Count
1314426 bp
Cytosine Count
1317435 bp
Genome Length
5198311 bp
Protein-coding Genes
4571 genes
Non-Coding Genes
468 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | YDC107_RS08120 | Not Available | Positive | 1644401 - 1644643 | 8863.8 |
| hypothetical protein | YDC107_RS08130 | Not Available | Positive | 1644934 - 1645302 | 14351.2 |
| hypothetical protein | YDC107_RS08135 | Not Available | Positive | 1645306 - 1645521 | 7895.29 |
| hypothetical protein | YDC107_RS28750 | Not Available | Positive | 1645518 - 1645790 | 10458.5 |
| is110 family transposase | YDC107_RS08145 | Not Available | Negative | 1646099 - 1646930 | 28955.2 |
| Transposase | YDC107_RS08150 | Not Available | Positive | 1646988 - 1647173 | 7071.34 |
| hypothetical protein | YDC107_RS08155 | Not Available | Negative | 1647659 - 1647790 | 4370.38 |
| l-lactate permease | YDC107_RS08160 | Not Available | Positive | 1648127 - 1648924 | 28224.1 |
| Is150 transposase b | YDC107_RS08165 | Not Available | Negative | 1648958 - 1650490 | 58918.8 |
| N-acyltransferase | YDC107_RS16045 | Not Available | Positive | 3275228 - 3275674 | 16580.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





