Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain YDC107 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1284644 bp
Thymine Count
1281806 bp
Guanine Count
1314426 bp
Cytosine Count
1317435 bp
Genome Length
5198311 bp
Protein-coding Genes
4571 genes
Non-Coding Genes
468 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| electron transport protein hydn | YDC107_RS06460 | Not Available | Negative | 1311793 - 1312320 | 19027.2 |
| dna-binding transcriptional regulator ascg | YDC107_RS06465 | Not Available | Negative | 1312469 - 1313479 | 36701.2 |
| pts cellobiose/arbutin/salicin transporter subunit iibc | YDC107_RS06470 | Not Available | Positive | 1313739 - 1315196 | 51066.1 |
| 6-phospho-beta-glucosidase ascb | YDC107_RS06475 | Not Available | Positive | 1315205 - 1316629 | 53834.7 |
| helix-turn-helix domain-containing protein | YDC107_RS06480 | Not Available | Negative | 1316708 - 1317127 | 15417.2 |
| type ii toxin-antitoxin system higb family toxin | YDC107_RS06485 | Not Available | Negative | 1317124 - 1317435 | 12493.9 |
| hydrogenase maturation peptidase hyci | YDC107_RS06490 | Not Available | Negative | 1317602 - 1318072 | 17057.6 |
| formate hydrogenlyase assembly protein hych | YDC107_RS06495 | Not Available | Negative | 1318065 - 1318475 | 15465.6 |
| formate hydrogenlyase subunit hycg | YDC107_RS06500 | Not Available | Negative | 1318472 - 1319239 | 27999.7 |
| formate hydrogenlyase subunit hycf | YDC107_RS06505 | Not Available | Negative | 1319239 - 1319781 | 20329.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





