Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain YDC107 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1284644 bp
Thymine Count
1281806 bp
Guanine Count
1314426 bp
Cytosine Count
1317435 bp
Genome Length
5198311 bp
Protein-coding Genes
4571 genes
Non-Coding Genes
468 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-arg | Not Available | Not Available | Positive | 1292473 - 1292549 | Not Available |
| Trna-arg | Not Available | Not Available | Positive | 1292748 - 1292824 | Not Available |
| Trna-ser | Not Available | Not Available | Positive | 1292828 - 1292920 | Not Available |
| carbon storage regulator csra | YDC107_RS06375 | Not Available | Negative | 1293236 - 1293421 | 6856.34 |
| alanine--trna ligase | YDC107_RS06380 | Not Available | Negative | 1293656 - 1296286 | 95979.8 |
| recombination regulator recx | YDC107_RS06385 | Not Available | Negative | 1296415 - 1296915 | 19411.1 |
| recombinase reca | YDC107_RS06390 | Not Available | Negative | 1296984 - 1298045 | 37975.6 |
| nicotinamide-nucleotide amidase | YDC107_RS06395 | Not Available | Negative | 1298125 - 1298622 | 17582.7 |
| lytic murein transglycosylase b | YDC107_RS06400 | Not Available | Negative | 1298767 - 1299852 | 40302.1 |
| pts glucitol/sorbitol transporter subunit iic | YDC107_RS06405 | Not Available | Positive | 1300108 - 1300671 | 20581.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





