Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain YDC107 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1284644 bp
Thymine Count
1281806 bp
Guanine Count
1314426 bp
Cytosine Count
1317435 bp
Genome Length
5198311 bp
Protein-coding Genes
4571 genes
Non-Coding Genes
468 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Hypothetical protein | YDC107_RS05495 | Not Available | Negative | 1104306 - 1104650 | 13128.8 |
| Putative replication protein p | YDC107_RS05500 | Not Available | Negative | 1104768 - 1105553 | 29601.4 |
| Putative primosomal protein | YDC107_RS05505 | Not Available | Negative | 1105550 - 1106365 | 30575.9 |
| Hypothetical protein | YDC107_RS05510 | Not Available | Negative | 1106381 - 1106581 | 7719.27 |
| Hypothetical protein | YDC107_RS05515 | Not Available | Negative | 1106732 - 1106962 | 8883.66 |
| Putative transcriptional repressor | YDC107_RS05520 | Not Available | Positive | 1107117 - 1107701 | 21917.9 |
| Hypothetical protein | YDC107_RS27965 | Not Available | Positive | 1107855 - 1108007 | 5945.08 |
| Hypothetical protein | YDC107_RS05525 | Not Available | Positive | 1108010 - 1108309 | 11544.7 |
| Hypothetical protein | YDC107_RS05530 | Not Available | Positive | 1108306 - 1109127 | 31727.6 |
| Putative recet | YDC107_RS05535 | Not Available | Positive | 1109124 - 1110065 | 34618.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





